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HOME » Cookies

Whole Wheat Chocolate Chip Cookies

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Compared to traditional chocolate chip cookies, these whole-grain chocolate chip cookies use whole wheat flour. In addition, we cut some sugar and replaced the butter with coconut oil, but we bet your family and friends won't even know the difference!

You can store them in an airtight container at room temperature for up to 3 days, but we were pretty sure they'd be eaten up before that!

For more whole wheat-inspired desserts, check out these recipes: Healthy chocolate chip cookies, white whole wheat chocolate chips cookie cake, whole wheat Chocolate Chip Cookie Cups, Maple White Whole wheat Oat Scones andWhole Wheat Cinnamon Rolls with Maple Cream Cheese Frosting

Chocolate Chip Cookies

How to Make Whole Wheat Chocolate Chip Cookies

Note: The full instruction is provided in the recipe card below. 

Put the coconut oil or butter in a microwave-safe bowl, cover it, and microwave it on medium power until melted. (Alternatively, melt in a small saucepan.) Cool slightly.

Whisk the light brown sugar, eggs, butter, salt, and both types of vanilla in a large bowl until smooth. Whisk the flour and baking soda in another bowl.

 Stir the dry ingredients into the wet ingredients with a wooden spoon; don't over-mix. Finally, stir in the bittersweet chocolate chips and walnuts, if using; cover it tightly, and chill in the refrigerator for at least 30 minutes.

If chilling for 3+ hours, make sure you let the cookie dough sit at room temperature for at least 1o to 15 minutes before rolling into balls; the cookie dough will be very stiff after being in the fridge that long.

Form and bake the cookies: Preheat the oven to 350 °F. Position racks in the upper and lower thirds of the oven. Line two baking sheets with parchment paper; set aside.

If you only have 1 baking sheet, let it cool completely between batches. Scoop two heaping tablespoons of the dough onto the prepared pans. Roll each mound in your hands to form a ball.

Place on the prepared baking sheet, about 2 to 3 inches apart. Bake one sheet at a time until golden brown around the edges but still light in the center, about 10 to 11 minutes.

Remove from the oven and let cool slightly on the baking sheet, then transfer the cookies to a wire rack to cool completely. Repeat forming the remaining dough into balls. Store cookies in a tightly sealed container for up to 3 days. 

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Recipe

Easy Whole Wheat Chocolate Chip Cookies

by Camila Benitez
Chocolate Chip Cookies
Compared to traditional chocolate chip cookies, these Whole Wheat Chocolate Chip Cookies use whole wheat flour. In addition, we cut some sugar and replaced the butter with coconut oil, but we bet your family and friends won't even know the difference! You can store them in an airtight container at room temperature for up to 3 days, but we were pretty sure they'll be eaten up before that!
  • Español
  • Print Recipe Pin Recipe Add to Collection Go to Collections
    Prep Time 30 minutes mins
    Cook Time 12 minutes mins
    Resting Time 30 minutes mins
    Total Time 1 hour hr 12 minutes mins
    Course Dessert
    Cuisine American
    Servings 30 Whole Wheat Chocolate Chip Cookies
    Calories 51 kcal

    Equipment

    • Parchment paper
    • baking sheets
    • Stand Mixer or electric mixer
    • medium bowl
    • Whisk
    • Plastic wrap
    • small bowl
    • cooking rack
    • airtight container
    • cookie scoop

    Ingredients
      

    • 190 g (1 ½ cups) whole wheat flour spoon and level to measure off with the back of a knife
    • 105 g (½ cup light brown sugar) packed, level off with the back of a knife
    • ½ cup coconut oil or unsalted butter , melted (allow to cool briefly)
    • 138 g (½ cup+ ¼ cup) dark chocolate chips, to taste
    • ½ tablespoon pure vanilla extract
    • ½ tablespoon clear vanilla or pure vanilla extract
    • 2 large eggs at room temperature
    • ½ teaspoon baking soda
    • ¼ teaspoon kosher salt

    Instructions
     

    • Put the coconut oil or butter in a microwave-safe bowl, cover, and microwave on medium power until melted. (Alternatively, melt in a small saucepan.) Cool slightly. Whisk the light brown sugar, eggs, butter, salt, and both types of vanilla in a large bowl until smooth.
    • Whisk the flour, and baking soda, in another bowl. Stir the dry ingredients into the wet ingredients with a wooden spoon; take care not to over-mix. Finally, stir in the bittersweet chocolate chips and walnuts, if using; cover it tightly, and chill in the refrigerator for at least 30 minutes.
    • If chilling for 3+ hours, make sure you let the cookie dough sit at room temperature for at least 1o to 15 minutes before rolling into balls; the cookie dough will be very stiff after being in the fridge that long.
    • Form and bake the cookies: Preheat the oven to 350 °F. Position racks in the upper and lower thirds of the oven. Line two baking sheets with parchment paper; set aside. If you only have 1 baking sheet, let it cool completely between batches.
    • Scoop two heaping tablespoons of the dough onto the prepared pans. Roll each mound in your hands to form a ball.
    • Place on the prepared baking sheet, about 2 to 3 inches apart. Bake one sheet at a time until golden brown around the edges but still light in the center, about 10 to 11 minutes. Remove from the oven and let cool slightly on the baking sheet, then transfer the cookies to a wire rack to cool completely. Repeat forming the remaining dough into balls. Store cookies in a tightly sealed container for up to 3 days.

    Notes

    How to Store & Re-Heat
    To store these Whole Wheat Chocolate Chip Cookies, keep them in an airtight container at room temperature for up to 3 days or freeze them for longer storage. To reheat, place them in a preheated oven at 350°F (175°C) for a few minutes or microwave for 10-15 seconds for a quick warm-up. This will ensure they stay delicious and ready to enjoy at any time.
    Make-Ahead
    Whole Wheat Chocolate Chip Cookies dough can be made a day ahead and stored in an airtight container in the refrigerator for up to 3 days.
    How to Freeze
    Whole Wheat Chocolate Chip Cookies dough can be frozen for up to 3 months: Drop the cookie dough in heaping tablespoons onto a sheet pan, let them set in the freezer until solid, then place them in a freezer bag and press out as much air as possible. Bake directly from frozen, as directed in the recipe, but add 1 to 2 extra minutes to the baking time.

    Nutrition

    Nutrition Facts
    Easy Whole Wheat Chocolate Chip Cookies
    Amount per Serving
    Calories
    51
    % Daily Value*
    Fat
     
    3
    g
    5
    %
    Saturated Fat
     
    2
    g
    13
    %
    Trans Fat
     
    0.001
    g
    Polyunsaturated Fat
     
    0.1
    g
    Monounsaturated Fat
     
    0.2
    g
    Cholesterol
     
    6
    mg
    2
    %
    Sodium
     
    26
    mg
    1
    %
    Potassium
     
    24
    mg
    1
    %
    Carbohydrates
     
    6
    g
    2
    %
    Fiber
     
    0.4
    g
    2
    %
    Sugar
     
    3
    g
    3
    %
    Protein
     
    1
    g
    2
    %
    Vitamin A
     
    9
    IU
    0
    %
    Vitamin C
     
    0.01
    mg
    0
    %
    Calcium
     
    12
    mg
    1
    %
    Iron
     
    0.2
    mg
    1
    %
    * Percent Daily Values are based on a 2000 calorie diet.

    Nutrition Disclaimer: The nutritional information provided is an estimate, calculated using standard data sources. Actual values may vary based on ingredient brands, preparation methods, and portion sizes. This information is for general reference only and should not be considered a substitute for professional dietary advice.

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    Published: Feb 20, 2021 · Last Updated: Jun 23, 2025 by Camila Benitez · This post may contain affiliate links

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    Welcome to Camila Made! My name is Camila Benitez. Here, I share our family's favorite recipes, all tried and loved, from holiday feasts and entertaining to everyday family meals and plenty of baked goods! 🍪😜

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